BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029F07LP1|AL429089
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1329 1734 0.0
>3x_Contig1329
Length = 7405
Score = 1734 bits (874), Expect = 0.0
Identities = 886/891 (99%)
Strand = Plus / Plus
Query: 1 acaaaacatgtncagaatggttccgcgagcttgagttttaccaaatcagttacgataaga 60
||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 6332 acaaaacatgtccagaatggttccgcgagcatgagttttaccaaatcagtaacgataaga 6391
Query: 61 caaatgaactgaacccaagtcgaatctataatggggtcttttcgaagaacaagcttaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6392 caaatgaactgaacccaagtcgaatctataatggggtcttttcgaagaacaagcttaatt 6451
Query: 121 cattggtctcaaaacttctgaataataagaacgtaaaagatctcatacagacatatgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6452 cattggtctcaaaacttctgaataataagaacgtaaaagatctcatacagacatatgaaa 6511
Query: 181 atggtattcatgtaattctcaatgaaaaggataagattcagaaggataccactacagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6512 atggtattcatgtaattctcaatgaaaaggataagattcagaaggataccactacagctt 6571
Query: 241 ctaccaagcagtccaaaacaaaatcggaagatacatcaactgataaaaacatcgatggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6572 ctaccaagcagtccaaaacaaaatcggaagatacatcaactgataaaaacatcgatggag 6631
Query: 301 tgtcaaaaacggagaaaggcgctacagaatctgaatctgaatctgatttattagaagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6632 tgtcaaaaacggagaaaggcgctacagaatctgaatctgaatctgatttattagaagaaa 6691
Query: 361 attcagaaagggaagctcctgaacttgattcagaaacagaagagttactttcaaaacaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6692 attcagaaagggaagctcctgaacttgattcagaaacagaagagttactttcaaaacaat 6751
Query: 421 acgatggtttattagtgggatctgatgaggaaagtgaaccagaatttcaattggacccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6752 acgatggtttattagtgggatctgatgaggaaagtgaaccagaatttcaattggacccaa 6811
Query: 481 cgatagactataaccaggtgactgatgaagaagacaaagaggaatattctgctgatgagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6812 cgatagactataaccaggtgactgatgaagaagacaaagaggaatattctgctgatgagg 6871
Query: 541 atgacgaggaaaattcggattcagactccggagagccctctaacaagaagcctaaatata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6872 atgacgaggaaaattcggattcagactccggagagccctctaacaagaagcctaaatata 6931
Query: 601 atctacctgagttaatgaacggttacattagtggcgatgaggaggaagatttggatgata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6932 atctacctgagttaatgaacggttacattagtggcgatgaggaggaagatttggatgata 6991
Query: 661 aggtagcaagaaagcaaatcgcagctgtgcctgtgaagaagaaccgtagaggacaaagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6992 aggtagcaagaaagcaaatcgcagctgtgcctgtgaagaagaaccgtagaggacaaagag 7051
Query: 721 ctagacaaaaaatctgggagaagaagtacggttcacaagctaagcatgttcaaagacagc 780
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7052 ctagacaaaaaatctgggagaagaagtacggttcacaagctaagcatgtccaaagacagc 7111
Query: 781 ttgagaaagaacataaagaacgtgaaacaagacaacaggaatacgaacaaagacaagcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7112 ttgagaaagaacataaagaacgtgaaacaagacaacaggaatacgaacaaagacaagcaa 7171
Query: 841 aacgtgaggsaaaagcagcccaattagcggaacaacagaggaagcgcgttt 891
||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 7172 aacgtgaggcaaaagcagcccaattagcggaacaacagaggaagcgcgttt 7222
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7767
Number of Sequences: 1807
Number of extensions: 7767
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)